Portal
structures
- ACOI - Coimbra Collection of Algae
- Chemical Engineering and Renewable Resources for Sustainability (CERES)
- Coimbra Laser Lab (CLL)
- Laboratory for Advanced Computing
- Laboratório de Engenharia de Fogo da Universidade de Coimbra (FIRElab)
- Trace Analysis and Imaging Laboratory (TAIL)
- UC-NMR | Nuclear Magnetic Resonance Facility
- University of Coimbra Bacteria Culture Collection (UCCCB)
- ViraVector
Scientific domains
- Agricultural Biotechnology
- Agricultural Sciences
- Biological Sciences
- Biomaterials
- Chemical Engineering
- Chemical Engineering
- Chemical Process Engineering
- Chemical Sciences
- Civil Engineering
- Civil Engineering
- Construction Engineering
- Earth & Related Environmental Sciences
- Engineering and Technology
- Environmental Biotechnology
- Environmental Engineering
- Exact Sciences
- Forensic Science
- Health sciences
- Industrial Biotechnology
- Medical & Health Sciences
- Medical Biotechnology
- Medical Engineering
- Medicinal Chemistry
- Microbiology
- Nanotechnology
- Natural Sciences
- Pharmacology and Pharmacy
- Physical Sciences
- Training & Support
Techniques
- Atomic Force Microscopy
- Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy (ATR | FTIR)
- Column chromatography
- Computação GPU
- Contact Angle Determination
- Crucible method
- Cultivation in WLD medium
- Differential Scanning Calorimetry (DSC)
- Differential electric conductivity
- Differential scanning calorimetry (DSC)
- Dynamic Light Scattering (DLS)
- Dynamic Light Scattering (DLS)
- Electric resistivity
- Electron Transport (ET)
- Elemental Analysis - CHNS
- Elemental Analysis - O
- Elemental Analysis - S
- Enzyme-Linked Immunosorbent Assay (ELISA)
- Flame Atomic Absorption Spectroscopy (FAAS)
- Fourier-Transform Infrared Spectroscopy | Mid-infrared Region (FTIR | MIR)
- Fourier-Transform Infrared Spectroscopy | Near-infrared Region (FTIR | MIR)
- Gas Chromatography (GC)
- Gas Chromatography with Flame-Ionization Detection (GC | FID)
- Gas Chromatography with Mass-Spectrometry detection (GC | MS)
- Gas chromatography (GC)
- Graphite Furnace Atomic Absorption Spectroscopy (GFAAS)
- Gravimetric analysis
- Gravimetry
- Hall effect
- Hemocytometer count
- High Performance Liquid Chromatography (HPLC)
- High Performance Liquid Chromatography coupled with an Evaporative Light-Scattering Detector (HPLC | ELSD)
- High Performance Liquid Chromatography with Refractive Index Detector (HPLC-RID)
- High Performance Liquid Chromatography with Ultraviolet-Visible Detection (HPLC | Uv-Vis)
- High Pressure Homogenizer (HPH)
- High-performance liquid chromatography (HPLC).
- High-resolution NMR spectroscopy in liquid state
- Inductively coupled plasma mass spectrometry (ICP-MS)
- Inverse gas chromatography (IGC)
- Ion Chromatography (IC)
- Karl Fischer Coulometric Titration
- Karl Fischer Volumetric Titration
- Laser Diffraction Spectroscopy (LDS)
- Measurement of Surface Tension
- Modulated Differential Scanning Calorimetry (MDSC)
- Nanoparticle tracking analysis (NTA)
- Optical Microscopy
- Parallel computing
- Polymerase Chain Reaction (PCR)
- Potentiometric titration
- Potentiometry (pH electrode)
- Quantitative real-time Polymerase Chain Reaction (qPCR)
- Refractometer - Refractive Index (RI)
- Rheology - Creep Recovery Test
- Rheology - Effects of Aging Time, Shear Rate, and Temperature
- Rheology - Shear Viscosity
- Rheology - Thixotropy
- Rheology - Viscoelastic Properties
- Rheology - Yield Stress
- Scanning Electron Microscopy (SEM)
- Simultaneous Differential Thermal Analysis (SDT)
- Specific heat (Cp)
- Spectrophotometry
- Spectrophotometry
- Sputtering
- Static Light Scattering (SLS)
- Testing rate based on strain rate
- Testing rate based on stress rate
- Thermogravimetric Analysis (TGA)
- Thermogravimetry (TG)
- Thin-layer chromatography (TLC)
- Ultraviolet-Visible Spectrophotometry (UV | Vis)
- VSM magnetometry
- Viscosity - Capillary Viscometer
- Visualization
- Western blotting
- X-ray diffraction (XRD)
- X-ray fluorescence spectroscopy (XRF)
- Zeta Potential
- digital droplet PCR (ddPCR)
Tags
- ASBC and EBC methods
- ATR
- Acetic acid bacteria
- Advanced Computing
- Aggregation
- Algae
- Amount of Water
- Análise Termogravimétrica (TGA)
- Artificial Intelligence
- Atomic Absorption
- BG11
- Bacteria
- Beer
- Big Data
- Biochemical analysis
- Bitterness
- CHNS-O
- Carotenoids
- Color
- Concrete materials
- Consultancy
- Contact Angle
- Cromatography
- Cryopreservation
- Culture media
- Cyanobacteria
- DNA
- Deposit
- Differential Scanning Calorimetry (DSC)
- Dynamic Light Scattering (DLS)
- EBC scale
- ELISA
- Elemental Analysis
- Empty capsids
- F/2
- FAAS
- FTIR
- Fatty acids
- Fire
- Flocculation
- Full capsids
- GC
- GFAAS
- Gas Chromatography
- Gene
- Genome
- Genomics
- Glycolipids
- HPLC
- Hemocytometer
- High Performance Liquid Chromatography
- IGC
- Ion Chromatography
- Ions
- Isolation
- Karl Fischer
- LC
- Lactic acid bacteria
- M7
- MHY
- MIDI
- Magnetism
- Metallic materials
- Microalgae
- Microanalysis
- Microbial Community
- Microorganisms
- Microplates
- Mixed culture
- Monosaccharides
- Morphology
- Multiproposes certificates
- NGS
- NMR
- NMR 1D
- NMR 2D
- Neutral lipids
- PCR
- Particles
- Phospholipids
- Pigments
- Polar lipids
- Polysaccharides
- Potentiometric titration
- Preservation
- Pure culture
- Purity
- QF-PCR
- RAPD
- Repicting
- Respiratory quinones
- Rheology
- S2T2
- SEM
- SRM scale
- Selective medium
- Sequencing
- Simultaneous Differential Thermal Analysis (SDT)
- Size
- Specific gravity
- Specific heat capacity (Cp)
- Spectroscopy
- Static Light Scattering (SLS)
- Strains
- Surface Tension
- Thermal Analysis
- Thin Layer Chromatography
- Thixotropy
- Titration
- Total acidity
- Total lipids
- Total reducing sugars
- Training
- Uv-Vis
- Viral particles
- Viral titer
- Viscosity
- WLD medium
- Western blotting
- Xanthophylls
- Yeast cell count
- Yeasts
- Z8
- Zeta Potential
- Zeta Potential
- digital PCR
- pH
71 available services
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Culture medium
Ready-to-use culture media or concentrated reagent kits (BG11, M7, S2T2, F/2 with different salinities, LC, Z8, MHY) Soil and Sphagnum extract for M7, S2T2, and LC media. The composition of the culture medium is sent with the medium.
Deposit of microalgae and cyanobacteria
Public deposit of microalgae and cyanobacteria
Determination of monosaccharides (HPLC-RI)
Extraction, hydrolysis, identification, and quantification of monosaccharides from microalgae and cyanobacteria by high-performance liquid chromatography (HPLC-RI).
Determination of pigments (HPLC-DAD)
Extraction, identification and quantification of pigments from microalgae and cyanobacteria by high-performance liquid chromatography (HPLC-DAD)
Determination of the fatty acids profile (GC-FID)
Extraction, identification and quantification of fatty acids from microalgae and cyanobacteria by gas chromatography (GC-FID).
Determination of total lipid and lipid fractions
Extraction and quantification of total lipid from microalgae and cyanobacteria by gravimetric methods; separation and quantification of neutral lipids, glycolipids and phospholipids by column chromatography
Determination of total sugars
Extraction and quantification of total sugars of microalgae and cyanobacteria by gravimetric analysis and spectrophotometry
Genomic DNA of microalgae and cyanobacteria from the collection
Genomic DNA from microalgae and cyanobacteria from collection, minimum of 2 µg of DNA. Qualitative and quantitative assessment by spectrophotometry.
Isolation and preservation
Isolation and preservation of microalgae and cyanobacteria (routine subculture and cryopreservation)
Microalgae and cyanobacteria strains from the collection
Microalgae and cyanobacteria live strains
Taxonomic identification of microalgae and cyanobacteria
Taxonomic identification of microalgae and cyanobacteria using a polyphasic approach (microscopy, molecular biology, biochemistry).
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Determination of the Water content of a Sample - Karl Fischer
The Karl Fischer titration is a sensitive method to quantify the % water in various types of samples.
Elemental Analysis
Mass percentage (% m/m) quantification of carbon (C), hydrogen (H), nitrogen (N), sulfur (S) and oxygen (O) present in a sample.
Identification and Quantification of Ions
Quantitative and qualitative determination of ions (anions and cations).
Identification and/or Quantification of Compounds - Chromatographic Methods
Separation of the various components of a mixture, with the aim of identifying and quantifying these components.
Identification and/or Quantification of Compounds - Spectroscopic Techniques
Spectroscopic analysis methods consist of measuring the amount of radiation emitted or absorbed by molecules.
Rheology and Viscosity Analysis
Study of the deformational behavior and the flow of matter subjected to stress, under certain thermodynamic conditions over a period of time. It includes properties such as: elasticity, viscosity and plasticity.
Stability and Particle Size Tests
Determination of particle sizes (from 3 nm to 5000 μm). Aggregation, agglomeration and flocculation studies.
Studies of Surface Properties
Determination of surface chemical and physical properties.
Thermal Analysis
Study of the behavior of materials as a function of time or temperature, when heated, cooled or kept at a constant temperature.
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Infrared and Raman Spectrospcopy
Infrared and Raman spectroscopic analysis applied to materials and food science, astrochemistry, arts and cultural heritage, and fundamental science
Multivariate Statistical Analysis of Spectroscopic Data
Multivariate statistical analysis and extracting information from spectral data through chemometrics
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Access to supercomputer Navigator
Access to cluster Navigator for computing, storage, visualization and data backup. Support is available to all users through a ticketing system.
High Performance Computing consulting
HPC consulting, namely about the existing software environment, parallel computing and usage of containers for specific workflows
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Compressive testing of hardened concrete
Determination of the compressive strength of hardened concrete specimens.
Reaction to fire: Gross heat of combustion test
Assessment of the gross heat of combustion of products at constant volume in a bomb calorimeter.
Reaction to fire: Ignitability test
Assessment of the ignitability of products by direct small-flame impingement using vertically oriented test specimens.
Reaction to fire: Non-combustibility test
Assessment of the the non-combustibility performance, under specified conditions, of homogeneous products and substantial components of non-homogeneous products.
Reaction to fire: Radiant panel test
Assessment of the burning behaviour and spread of flame of horizontally mounted floorings exposed to a heat flux radiant gradient, when ignited with pilot flames.
Reaction to fire: Single burning item test
Assessment of the burning behaviour and spread of flame of vertically mounted specimens (in a right angle) exposed to thermal attack by a single burning item (SBI).
Tensile testing of metallic materials
Determination of the mechanical properties of metallic materials at room temperature.
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Carbon coating of samples for SEM imaging/analysis
Revestimento por película de cabono de amostras para análise/imagem por microscopia eletrónica de varrimento SEM
Characterisation of thin films and coatings by Grazing Incidence X-ray diffraction (GIXRD)
Aquisição de difratogramas de RX em materiais policristalinos (pó) à temperatura ambiente para identificação de fases, quantificação ou refinamento estrutural pelo método de Rietveld.
Electric transport properties (ETO)
Measurement of electrical transport properties (resistivity, Hall effect, I(V) e dI/dV) in the temperature range 1.8 K-400 K and magnetic field 0-9 T.
Elemental quantitative analysis by mass spectrometry (ICP-MS)
Elemental quantitative analysis by mass spectrometry (ICP-MS) in diluted aqueous solutions
Imaging by Electron Scanning Microscopy (SEM)
Imaging by Electron Scanning Microscopy (SEM)
Measurement of the thickness of thin films by X-ray fluorescence (XRF)
Measurement of the thickness of thin films and coatings by X-ray fluorescence (XRF)
Metallic coating of SEM samples by sputtering
Metallic coating of samples for SEM imaging/ analysis by sputtering
Powder X-ray diffraction (XRD) at room temperature
Obtenção de imagem por microscopia de força atómica (AFM)
Powder X-ray diffraction (XRD) at room temperature (XRD)
Aquisição de difratogramas de RX em materiais policristalinos (pó) à temperatura ambiente para identificação de fases, quantificação ou refinamento estrutural pelo método de Rietveld.
Powder X-ray diffraction (XRD) at room temperature (XRD)
Fornecimento de ácido nítrico ultra-puro, obtido por destilação em sub-eubição, para uso em preparação de amostras para análise por ICP-MS
Powder X-ray diffraction (XRD) at room temperature (XRD)
Medidas de magnetização em função da temperatura (1.8-400K) e campo magnético aplicado (0-9T) pela técnica VSM
Powder X-ray diffraction (XRD) at room temperature (XRD)
Aquisição de perfis de refletometria de RX (XRR) para caracterização de filmes finos e revestimentos (espessura do filme, rugosidade, etc.)
Powder X-ray diffraction (XRD) at room temperature (XRD)
Aquisição de difratogramas de RX em materiais policristalinos (pó) a temperatura variável (ambiente - 1450 ºC) para identificação de fases, quantificação ou refinamento estrutural pelo método de Rietveld.
Powder X-ray diffraction (XRD) at room temperature (XRD)
Medição de propriedades de transporte térmico
Simultaneous Thermal Analysis (STA) - Thermogravimetry (TG) + Differential Scanning Calorimetry (DSC)
Medição simultânea de variação de entalpia e de massa, em processos de aquecimento e arrefecimento, entre 20 e 1000 ºC para estudo e caracterização termodinâmica de transições de fase, decomposição térmica, etc.
Specific heat measurement (Cp)
Specific heat measurements as function of temperature and applied magnetic field.
Torque Magnetometry (TqM)
Medidas de magnetização em função da temperatura (1.8-400K) e campo magnético aplicado (0-9T) pela técnica de magnetometria de torque
X-ray Fluorescence Analysis (XRF) via Energy Disersive Spectroscopy EDS
Obtenção de espectros de fluorescência de raios-X por excitação de feixe eletrónico (espectroscopia EDS)
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1D 13C-NMR Spectrum
Acquisition of 13C-NMR Spectrum
1D 1H-NMR Spectrum
Acquisition of 1H-NMR spectrum.
2D 1H-NMR Spectra
Acquisition of 2D homonuclear NMR spectra
2D heteronuclear NMR spectra
Acquisition of 2D heteronuclear NMR spectra
NMR spectra of less common nuclei (2H, 11B, 19F, 31P, 195Pt, etc)
Acquisition of 1D NMR spectra for less common nuclei
Quantitative 1H-NMR spectroscopy
1D 1H-NMR spectrum with absolute quantification of main species
Structural analysis of small molecules
Assignment of 1D and 2D NMR spectra and structure determination of small molecules from different origins
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Analysis of Fatty Acids (GC, MIDI)
Bacterial Fatty Acids identification and quantification by Gas Chromatography using the standard MIS Library Generation Software (Sherlock Microbial ID System).
Analysis of Polar Lipids (TLC)
Analysis of Polar Lipids from bacterial strains by Thin Layer Chromatography.
Analysis of Respiratory Quinones (HPLC)
Analysis of Respiratory Quinones from bacterial strains by High Performance Liquid Chromatography.
Bacterial Strains from Public Collection
Bacterial Strains from Public Collection: Active cultures | Freeze-dried strains
Beer Analysis
Bacteria detection on WLD selective medium | Bacteria identification | Hemocytometer yeast cell count | Beer specific gravity at 20 °C | pH | Total acidity | Color on SRM scale | Color on EBC scale | Beer bitterness | Total reducing sugars
Biochemical Analysis
Analysis of fatty acids (GC, MIDI) | Analysis of polar lipids (TLC) | Analysis of respiratory quinones (HPLC)
Bioinformatic Services
Whole genome analysis | Phylogenomic analysis
Deposit of Bacterial Strains
Public Deposit | Safe Deposit | Renew the Safe Deposit Service | Annual Maintenance Fee | Release of Strain
Identification and Characterization
Genomic DNA Extraction | Sequencing of 16S rRNA gene | Phylogenetic analysis | Sequence Analysis of Genes | Mol% G+C Content Analysis of Genomic DNA | RAPD Fingerprinting for two Strains | Whole Genome Sequencing of one Prokaryotic strain
Isolation and Preservation
Isolation from a mixed culture plate | Preservation in −80 °C
Microbial Diversity
Denaturing Gradient Gel Electrophoresis (DGGE) | Phospholipid Fatty Acid Analysis (PLFA) | Barcoding Sequencing
Other Services
Multiproposes certificates (not related with describing of novel species) | Consultancy | Training and related services
Phenotypic Characterization
Basic Phenotypic Characterization (based on API® strips) | BIOLOG Microplates (for extensive testing of oxidation of different carbon sources) | Morphological study (celular morphologyl, Gram, KOH, catalase, oxidase)
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Titration and Characterization of NON-VIRAL PARTICLES
Measurement and Characterization of non-viral vectors (Extracellular vesicles / Exosomes) in various types of samples using a diferent set of assays.
Titration and Characterization of VIRAL particles
Measurement of viral vector titer (AAV, LV, vesoxome) in various types of samples using a diferent set of assays.