Portal
structures
- ACOI - Coimbra Collection of Algae
- Chemical Engineering and Renewable Resources for Sustainability (CERES)
- Coimbra Laser Lab (CLL)
- Cytogenetics and Genomics Laboratory
- Functional Genomics and Sequencing - UCGenomics
- Laboratório de Anatomia Patológica e Patologia Molecular
- Laboratório de Microscopia Ótica Avançada (LMOA)
- Laboratório de Radioatividade Natural (LRN)
- Mitochondrial Biomedicine and Theranostics Laboratory
- Trace Analysis and Imaging Laboratory (TAIL)
- ViraVector
- Water Microbiology Laboratory
- iLAB - Microscopy and Bioimaging Lab
Categories
Scientific domains
- Agricultural Biotechnology
- Agricultural Sciences
- Biological Sciences
- Bioproducts, Biomaterials, Bioplastics, Biofuels, Bio-derived Bulk and Fine Chemicals and Bio-derived Novel Materials
- Chemical Engineering
- Chemical Process Engineering
- Chemical Sciences
- Earth & Related Environmental Sciences
- Engineering and Technology
- Exact Sciences
- Genetics and Heredity
- Health sciences
- Human Genetics
- Industrial Biotechnology
- Medical & Health Sciences
- Medical Biotechnology
- Medical Engineering
- Medical geology
- Microbiology
- Molecular Biology
- Molecular Pathology
- Nanotechnology
- Natural Sciences
- Natural radioactivity
- Neurosciences
- Physical Sciences
- Reproductive Biology
Techniques
- 3D imaging
- Alpha spectrometry in the range (0; 10) MeV and energy resolution lower than 20 keV
- Alpha spectroscopy with a high efficiency ionization chamber (1 cpm at 20 Bq/m3)
- Array Comparative Genomic Hybridization - Array-CGH
- Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy (ATR | FTIR)
- Automatic Sanger sequencing
- Automatic microscopic analysis of traces on passive detectors
- C banding
- Calculation from other tests
- ChIP (chromatin immunoprecipitation assay)
- Chef & Ion Torrent S5 (NGS)
- Circulating free DNA (cfDNA) extration
- Colocalisation assays
- Column chromatography
- Contact Angle Determination
- Conventional PCR
- Cytogenetics
- DNA extraction
- Differential Scanning Calorimetry (DSC)
- Dynamic Light Scattering (DLS)
- EBV based immortalization
- Elemental Analysis - CHNS
- Elemental Analysis - O
- Elemental Analysis - S
- FISH - Fluorescence in situ Hybridization
- FRAP - fluorescence recovery after photobleaching
- FRAXA by PCR
- FRAXA by Triplet Repeat Primed PCR
- Flame Atomic Absorption Spectroscopy (FAAS)
- Fluorescence imaging with optical seccioning
- Fluorescence in situ hybridization
- Fourier-Transform Infrared Spectroscopy | Mid-infrared Region (FTIR | MIR)
- Fourier-Transform Infrared Spectroscopy | Near-infrared Region (FTIR | MIR)
- G banding
- Gas Chromatography (GC)
- Gas Chromatography with Flame-Ionization Detection (GC | FID)
- Gas Chromatography with Mass-Spectrometry detection (GC | MS)
- Genetic Analyser 3130 - ThermoFisher (Sanger sequencing)
- Graphite Furnace Atomic Absorption Spectroscopy (GFAAS)
- Gravimetric analysis
- Hematoxylin-eosin
- High Performance Liquid Chromatography coupled with an Evaporative Light-Scattering Detector (HPLC | ELSD)
- High Performance Liquid Chromatography with Refractive Index Detector (HPLC-RID)
- High Performance Liquid Chromatography with Ultraviolet-Visible Detection (HPLC | Uv-Vis)
- High Pressure Homogenizer (HPH)
- High resolution gamma-ray spectrometry in the energy interval (40;2800) keV
- High-performance liquid chromatography (HPLC).
- Illimuna MiSeq (NGS)
- Imaging and neurotransmitter uncaging
- Imaging of live tissue sections
- Immunohistochemistry
- Inverse gas chromatography (IGC)
- Ion Chromatography (IC)
- Karl Fischer Coulometric Titration
- Karl Fischer Volumetric Titration
- Laser Diffraction Spectroscopy (LDS)
- Liquid Scintillation Counting with Guard Compensation Technology (GCT) and Guard Background Reduction (BGO)
- Live cell imaging
- Long PCR (mtDNA)
- Measurement of Surface Tension
- Methylation-Specific Multiplex Ligation-dependent Probe Amplification - MS-MLPA
- Microtomy
- Modulated Differential Scanning Calorimetry (MDSC)
- Molecular cytogenetics
- Multiplex Ligation-dependent Probe Amplification - (MLPA)
- NGS - Next Generation Sequencing
- NOR banding
- Next Generation Sequencing (NGS)
- Next generation sequencing - NGS
- Optical Microscopy
- PCR-RFLP
- Photomanipulation experiments
- Qualitative Real-Time PCR
- Quantitative fluorescent PCR (QF-PCR)
- Real-Time PCR
- Refractometer - Refractive Index (RI)
- Rheology - Creep Recovery Test
- Rheology - Effects of Aging Time, Shear Rate, and Temperature
- Rheology - Shear Viscosity
- Rheology - Thixotropy
- Rheology - Viscoelastic Properties
- Rheology - Yield Stress
- SHG-Secong Harmonic Generation
- Sample preparation for microscopy
- Scanning Confocal Microscopy
- Scanning Electron Microscopy
- Scanning Electron Microscopy (SEM)
- Simultaneous Differential Thermal Analysis (SDT)
- Spectral detection
- Spectrophotometry
- Staining digitizer
- Test for Helicobacter pylori
- Thermogravimetric Analysis (TGA)
- Tissue Culture
- Tissue processing
- Transmission Electron Microscopy
- Ultra Low Level Liquid Scintillation Counting with anticoincidence guard detector and lead radiation shield
- Ultraviolet-Visible Spectrophotometry (UV | Vis)
- ViraVector - EVs isolation platform
- ViraVector - AAV innovative platform
- ViraVector - LV innovative platform
- ViraVector - Modified EVs innovative platform
- Viscosity - Capillary Viscometer
- Widefield Microscopy
- Y Chromosome Microdeletion Detection
- Zeta Potential
Tags
- AAV
- ATR
- Adeno-associated viral vector
- Algae
- Amount of Water
- Análise Termogravimétrica (TGA)
- Atomic Absorption
- C banding
- CHNS-O
- CNV
- CYP450
- Carotenoids
- Centromeric
- Clean room
- Contact Angle
- Cromatography
- Cryopreservation
- Cyanobacteria
- Cytogenetics
- Deletions
- Diagnóstico pré natal
- Differential Scanning Calorimetry (DSC)
- Duplications
- EV-AAVs
- EVs
- Elemental Analysis
- Exosomes
- Extracelular vesicles
- FAAS
- FTIR
- Fatty acids
- Flocculation
- Fluorescence microscopy
- Functional Genomics
- G banding
- GC
- GFAAS
- Gas Chromatography
- Gene therapy
- Genomics
- Glycolipids
- HPLC
- High Performance Liquid Chromatography
- IGC
- Inborn errors of metabolism
- Ion Chromatography
- Ions
- Isolation
- Karl Fischer
- LV
- Lentivirus
- Light microscopy
- Marker chromosome
- Methylation
- Microalgae
- Microanalysis
- Mitochondrial diseases
- Monosaccharides
- Multiphoton microscopy
- NGS
- NIPT
- NOR banding
- Neutral lipids
- Particles
- Personalized Medicine
- Pharmacogenomics
- Phospholipids
- Pigments
- Polysaccharides
- Production
- Purification
- QF-PCR
- Rare diseases
- Rheology
- Ring Chromosome
- Segurança alimentar
- Simultaneous Differential Thermal Analysis (SDT)
- Size
- Specific heat capacity (Cp)
- Spectroscopy
- Sub-telomerics regions
- Surface Tension
- Theragnostics
- Thermal Analysis
- Thixotropy
- Titration
- Total lipids
- Total reducing sugars
- Transcriptomics
- Tumores
- Uv-Vis
- Viral vectors
- Viscosity
- Whole Chromosome Painting - WCP
- Xanthophylls
- Zeta Potential
- Zeta Potential
- carbon-14
- cfDNA
- fuel
- gamma radiation
- indoor air quality
- ionizing radiation
- lentiviral vector
- lung cancer
- mitigation
- mitochondria
- mtDNA
- occupational health and safety
- radioactivity
- radionuclides
- radon
- remediation
- risk evaluation
- sampling
- vexosomes
- water quality
86 available services
![](https://pages.uc.pt/site/assets/files/548458/acoi_algoteca_logo-01.png)
Determination of monosaccharides (HPLC-RI)
Extraction, hydrolysis, identification, and quantification of monosaccharides from microalgae and cyanobacteria by high-performance liquid chromatography (HPLC-RI).
Determination of pigments (HPLC-DAD)
Extraction, identification and quantification of pigments from microalgae and cyanobacteria by high-performance liquid chromatography (HPLC-DAD)
Determination of the fatty acids profile (GC-FID)
Extraction, identification and quantification of fatty acids from microalgae and cyanobacteria by gas chromatography (GC-FID).
Determination of total lipid and lipid fractions
Extraction and quantification of total lipid from microalgae and cyanobacteria by gravimetric methods; separation and quantification of neutral lipids, glycolipids and phospholipids by column chromatography
Determination of total sugars
Extraction and quantification of total sugars of microalgae and cyanobacteria by gravimetric analysis and spectrophotometry
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Determination of the Water content of a Sample - Karl Fischer
The Karl Fischer titration is a sensitive method to quantify the % water in various types of samples.
Elemental Analysis
Mass percentage (% m/m) quantification of carbon (C), hydrogen (H), nitrogen (N), sulfur (S) and oxygen (O) present in a sample.
Identification and Quantification of Ions
Quantitative and qualitative determination of ions (anions and cations).
Identification and/or Quantification of Compounds - Chromatographic Methods
Separation of the various components of a mixture, with the aim of identifying and quantifying these components.
Identification and/or Quantification of Compounds - Spectroscopic Techniques
Spectroscopic analysis methods consist of measuring the amount of radiation emitted or absorbed by molecules.
Rheology and Viscosity Analysis
Study of the deformational behavior and the flow of matter subjected to stress, under certain thermodynamic conditions over a period of time. It includes properties such as: elasticity, viscosity and plasticity.
Stability and Particle Size Tests
Determination of particle sizes (from 3 nm to 5000 μm). Aggregation, agglomeration and flocculation studies.
Studies of Surface Properties
Determination of surface chemical and physical properties.
Thermal Analysis
Study of the behavior of materials as a function of time or temperature, when heated, cooled or kept at a constant temperature.
![](https://pages.uc.pt/site/assets/files/548460/captura_de_ecra_2022-10-07-_a_s_15_32_07.png)
Fotobiologia
i) viabilidade celular; ii) fototoxicidade; iii) "uptake"; e iv) mecanismo de morte celular
Infrared and Raman Spectrospcopy
Infrared and Raman spectroscopic analysis applied to materials and food science, astrochemistry, arts and cultural heritage, and fundamental science
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Cryopreservation
Cryopreservation in liquid nitrogen
Developmental Disorders
LCG provides solutions in Genomics, Conventional and/or Molecular Cytogenetics and Molecular Biology for genetic studies of Developmental Disorders.
DNA extration
DNA extration from different biological samples.
Genetical family story
These studies are carried out taking into account the alterations present in the index case, using the most appropriate techniques in the set of existing LCG techniques to characterize the alterations.
High resolution banding karyotype
The study of the constitutional karyotype makes it possible to observe the entire genome, being able to identify both balanced and unbalanced structural chromosomal alterations, as well as alterations in the number of chromosomes and mosaics.
Infertility
Infertility test by Cytogentics and Molecular Biology techniques.
Lymphocyte immortalization
EBV based lymphocyte immortalization
Methylation-specific MLPA (MS-MLPA)
MS-MLPA can be used for the analysis of both methylation as well as copy number changes of syndromic related regions.
Molecular Cytogenetics - Fluorescence In Situ Hybridization (FISH)
Molecular cytogenetics (FISH) allows a more detailed study of specific chromosomal regions, increasing the resolving power of conventional cytogenetics. The LCG provides an extensive library of FISH probes.
Molecular Rapid Aneuploidy
The rapid screening of the most common aneuploidies allows, in a short period of time (24h-72h), to evaluate the ploidy (number) of chromosomes 13, 18 and 21 and of the sex chromosomes X and Y.
Multiplex Ligation-dependent Probe Amplification - MLPA
MLPA can be used for the analysis of copy number changes in DNA of syndromic related regions
Pre-natal non invasive test (NIPT)
Non invasive pre-natal test (NIPT)
Prenatal Diagnosis
The LCG performs a wide variety of exams in Prenatal. The fetal genome can be analyzed more widely, by molecular karyotype (aCGH) and constitutional karyotyope, More specific techniques like FISH, MLPA and MS-MLPA can also be performed whenever necessary.
Tissue Culture
Tissue culture of different tissues.
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Cancer molecular profiles
Molecular tumour profiling can predict an individual’s prognosis by interpreting the expression pattern of a panel of tumour-related genes.
Liquid biopsy in cancer
This procedure allows to study DNA and RNA from cancer cells from a tumor that are circulating in the blood. May be used to help find cancer at an early stage and be used to help plan treatment.
Metagenomics
Investigate the microbiota composition of complex environments. This application is based on the amplification of a specific region of the 16S rRNA gene for bacteria or the ITS (Internal Transcribed Spacer) region for fungi.
Multiplex ligation-dependent probe amplification (MLPA)
This application is commonly used to identify exon-level copy number variants (CNVs) not detected by conventional sequencing.
NGS Panels
NGS panels are collections of genes that have been selected to identify a genetic cause of disease or to study regions of interest. It allows simultaneous sequencing of all the genes, in a faster and more cost-efffective way than conventional sequencing.
RNA-seq
RNA-seq allows gene expression analysis across the whole transcriptome or specifically, reveal the presence and quantity of RNA of selected genes.
Sanger Sequencing
SNVs/SNPs identification. This application is also used to identify exon-level copy number variants (CNVs).
SNVs/SNPs Genotyping
SNVs/SNPs identification.
![](https://pages.uc.pt/site/assets/files/559830/4_2.png)
Analysis of cells and tissues to search for genetic alterations associated with tumours for personalised therapy
DNA/RNA target gene search with the Oncomine Precision Assay panel (50 genes)
Analysis of peripheral blood to search for genetic alterations associated with tumours for personalised therapy - Liquid biopsy
DNA and RNA target gene search with the Oncomine Precision Assay panel (50 genes)
DNA/RNA extraction
Isolation of nucleic acids from tissues and cells
Image analysis with/without algorithms
Analysis of areas of interest; nuclear / cytological morphometry; evaluation of immunohistochemistry techniques
Immunohistochesmistry-IHC
Immunohistochemistry (IHC) is a method of fiding antigens (e.g. proteins) in tissues by exploiting the principle of specific binding of antibodies to antigens in biological tissue.
Preparation of formalin-fixed, paraffin-embedded (FFPE) block of tissue
Standard technique to create a formalin-fixed, paraffin-embedded (FFPE) block of tissue
Qualitative Real-time PCR
Technology that comprises the entire process from paraffin-embedded tissue sample to the result (nucleic acid isolation, amplification, real-time PCR detection and data analysis) in less than three hours
Scanning of slides
Scanning of slides for digital support
Searching for regions on the chromosome by hybridization of fluorescent probes
Molecular cytogenetic technique using fluorescent probes that bind only to certain regions of a nucleic acid sequence with a high degree of complementarity.
Slide preparation from paraffin blocks
Section of paraffin block to prepare slides for further staining
Staining of cell structures and other agents
Hematoxylin-eosin staining Test for Helycobacter Pylori
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Imaging acquisition by multiphoton microscopy
Multiphoton microscopy on live or fixed samples, from different origins. Specialized technical training.
Imaging aquisition by confocal microscopy
Confocal microscopy on live or fixed biological samples, from different origins. Specialized technical training.
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Gross Alpha and/or Beta
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
In situ Radon and/or toron exhalation
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Index I
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Indoor radon (Rn-222)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Polonium (Po-210)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Proportion of Biofuel
Determination of the proportion of biofuel in fuels.
Radium (Ra-226)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Radon and/or toron exhalation from samples
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Radon in water (Rn-222)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Radon sampling
Collection, preservation and transport of samples for analysis of radioactive parameters.
Sampling for Gross Alpha and/or Beta, or Total Indicative Dose
Collection, preservation and transport of samples for analysis of radioactive parameters.
Sampling for indoor radon (Rn-222)
Placement and/or collection of detectors for radon analysis.
Sampling for terrestrial radionuclides
Collection, preservation and transport of samples for analysis of radioactive parameters.
Soil gas radon
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Soil gas radon
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Terrestrial radionuclides (Ra-226, Th-232 & K-40)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Terrestrial radionuclides (Ra-226, Th-232 & K-40)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Total Indicative Dose
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
Uranium (U-238 & U-234)
Measurement of naturally-occurring radionuclides of natural, human-made or both origins, that may pose a risk to human health.
![](https://pages.uc.pt/site/assets/files/551678/captura_de_ecra_2022-10-07-_a_s_15_55_20.png)
Genetic expression studies
Characterization of mRNA. Provides reliable and reproducible characterization of total RNA and mRNA. Objective measurement of RNA quality with RIN (RNA Integrity Number).
Study of the mitochondrial genome
Allows identification of alterations in mitochondrial DNA, which may elucidate disease and bioenergetics dysfunction. Mitochondrial biology and pathophysiology is a complex field of research, which may help to answer a broad range of questions.
Study of the nuclear genome
Sequencing of whole nuclear exome or individual genes (in familial/trio or individual), including bioinformatics analysis for pathogenicity evaluation. Confirmation of specific mutations.
Theranostics Studies in Precision Medicine
Study of genes associated to pharmacogenomics. Study of biochemical biomarkers, like those associated to wellness.
![](https://pages.uc.pt/site/assets/files/549640/captura_de_ecra_2022-10-10-_a_s_14_23_52.png)
Elemental quantitative analysis by mass spectrometry (ICP-MS)
Elemental quantitative analysis by mass spectrometry (ICP-MS) in diluted aqueous solutions
Imaging by Electron Scanning Microscopy (SEM)
Imaging by Electron Scanning Microscopy (SEM)
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Isolation of Extracellular Vesicles / Exosomes from biological fluids
Isolation of Extracellular Vesicles / Exosomes from diferent biological fluids
Production and Purification of Adeno-associated viral vectors (AAVs)
Production of highly pure AAVs (AAV1, AAV2, AAV5, AAV6, AAV8, AAV9, PhP.eB) using an optimized platform based on high performance liquid chromatography.
Production and Purification of Lentiviral vectors (LVs)
Production of highly pure lentiviral vectors using an optimized platform.
Production and Purification of modified exosomes
Production of modified exosomes - extracelular vesicles (EVs)
![](https://pages.uc.pt/site/assets/files/1449725/lma_1800x0-1.jpeg)
Análise microbiológica de alimentos prontos para consumo e de matérias-primas
Parâmetros a analisar: Microrganismos viáveis a 30ºC Listeria monocytogenes e Listeria spp. Salmonella spp. Enterobacteriaceae Bacillus cereus Staphylococcus aureus Campylobacter spp. Escherichia coli Clostridium perfringens Bolores e leveduras
Análise microbiológica de mãos de manipuladores de alimentos
Parâmetros a analisar Microrganismos viáveis a 30ºC Staphylococcus aureus Escherichia coli
Análise microbiológica de superfícies de ambiente de preparação/distribuição alimentar
Parâmetros a analisar: Microrganismos viáveis a 30ºC Listeria monocytogenes e Listeria spp. Enterobacteriaceae Staphylococcus aureus Escherichia coli Bolores e leveduras
![](https://pages.uc.pt/site/assets/files/548779/fmuc_v_fundoclaro.png)
Microscopy Analysis by Light or Electron Microscopy
Observation and analysis of live or fixed samples.
Sample Processing for Electron Microscopy
The iLAB performs and provides the required materials and equipments necessary for sample processing for electron microscopy including fixation, dehydration, resin embedding and ultramicrotomy.